• Barbier EB, Koch EW, Silliman BR, Hacker SD, Wolanski E, Primavera J, Granek EF, Polasky S, Aswani S, Cramer LA, Stoms DM, Kennedy CJ, Bael D, Kappel CV, Perillo GME, Reed DJ. 2008. Coastal Ecosystem–Based Management with Nonlinear Ecological Functions and Values. Science. 319: 321-323.
• Lebata MJHL, Le Vay L, Primavera JH, Walton ME and Binas JB. 2007. Baseline Assessment of Fisheries for Three Species of Mudcrabs (Scylla spp.) in the Mangroves of Ibajay, Aklan, Philippines. Bulletin of Marine Science. 30(3). pp 891-904.
• Primavera JH, Altamirano JP, Lebata MJHL, delos Reyes Jr. AA and Pitogo CL. 2007. Mangrove and Shrimp Pond Culture Effluents in Aklan, Panay Is., Central Philippines. Bulletin of Marine Science. 80(3). pp795-804.
• Walton ME, Le Vay L, Lebata JH, Binas J and Primavera JH. 2007. Assessment of the Effectiveness of Mangrove Rehabilitation using Expolited and Non-exploited Indicator Species. Biological Conservation. 138. pp. 180-188.
• Williams MJ, Coles R and Primavera JH. 2007. A lesson from cyclone Larry: An untold story of the succcess of good coastal planning. Estuarine, Coastal and Shelf Science. Volume 71: 364-367.
• Walton MEM, Samonte-Tan GPB, Primavera JH, Edwards-Jones G and Le Vay L. 2006. Are Mangroves Worth Replanting? The Direct Economic Benefits of a Community-Based Reforestation Project. Environmental Conservation.
• Primavera JH and Agbayani RF. Comparative Strategies in Community-Based Mangrove Rehabilitation Programmes in the Philippines. [PDF file]
• Walton ME, Le Vay L, Lebata JH, Binas J, and Primavera JH. 2006. Seasonal abundance, distribution and recuitment of mud crabs (Scylla spp.) in replanted mangroves. Estuarine, Coastal and Shelf Sciences 66 (493-500). 
• Primavera JH. 2005. GLOBAL VOICES OF SCIENCE: Mangroves, Fishponds, and the Quest for Sustainability. Science Vol 310:5745 (57-59). [MSWord file]
• Primavera JH. 2002. Coastal Resource Management in the Philippines: Seeds of Hope. Proceedings of "The Third Meeting of the Project on ASPACO". Okinawa, Japan. [PDF file]
• Primavera JH. 2001. A Resource book entitled "Utilizing Different Aquatic Resources for Livelihoods in Asia". [PDF file]
• Primavera JH. 2001. Community Based Rehabilitation of Mangroves in Utilizing Different Aquatic Resources for Livelihood in Asia: A Resource Book. Institute of Rural Reconstruction (IIRR). pp333-339.
• Primavera JH. 2000. Development and conservation of Philippine mangroves: institutional issues. Ecological Economics 35 (91-106).
• Primavera JH. 2000. Integrated Mangrove - Aquaculture Systems in Asia. Integrated Coastal Zone Management. Autumn 2000 edition (121-128).[PDF file]
• Primavera JH. 2000. Mangroves in the Philippines. Proceedings of an International Workshop of Asia-Pacific Cooperation on Research for Conservation of Mangroves, Okinawa, 26-30 March 2000. [PDF file]
• Primavera JH. 1998. Mangroves as Nurseries: Shrimp Populations in Mangrove and Non-magrove Habitats. Estuarine, Coastal and Shelf Sciences 46 (457-464).
• Primavera JH. 1997. Fish predation on mangrove-associated penaeids: The role of structures and substrate. Journal of Experimental Marine Biology and Ecology Vol 215 (205-216).
• Primavera JH. 1996. Stable carbon and nitrogen isotope ratios of Penaeid juveniles and primary producers in a riverine mangrove in Guimaras, Philippines. Bulletin of Marine Science 58:3 (675-683). [PDF file]
• Primavera JH. 1995. Mangroves and brackishwater pond culture in the Philippines. Hydrobiologia 295 (303-309). [PDF file]
• Primavera JH, Sadaba RB, Lebata MJHL and Altamirano JP. Handbook of Mangroves in the Philippines - Panay.
  

OTHER PAPERS

• Primavera JH. 2006. Development and Sustainability of Philippine Aquaculture. in International Conference; Hubs, Harbours and Deltas in Southeast Asia: Multidisciplinary and Intercultural Perspectives. 6-8 February 2006. Royal Academy of Overseas Sciences. Pnom Penh, Cambioda. pp 295-313.
• Okuzawa K, Maliao RJ, Quinitio ET, Buen-Ursua SMA, Lebata MJHL, Gallardo WG, Garcia LMB and Primavera JH. 2008. Stock Enhancement of Threatened Species in Southeast Asia. Reviews in Fisheries Science. 16(1): 1-9.
• Primavera JH. 2006. Overcoming the impacts of aquaculture on the coastal zone. Ocean and Coastal Management. Volume 49: 531-545.
• Primavera JH and Lebata MJH. 2000. Size and diel differences in activity patterns of Metapenaeus ensis, Penaeus latisulcatus and P. merguiensis. Marine Freshwater Behaviour Physiology 33:173-185. [PDF file]
• Primavera JH and Quinitio ET. 2000. Runt-deformity syndrome in cultured giant 
  tiger prawn Penaeus monodon. Journal of Crustacean Biology 20(4):796-802. [PDF file]
• Naylor RL, Goldburg RJ, Primavera JH, Kautsky N, Beveridge MCM, Clay J, Folke C, Lubchenco J, Mooney H, and Troell M. 2000. Effect of aquaculture on world fish supplies. Nature Vol 405 (1017-1024). [PDF file]
• Primavera JH. 1998. Tropical Shrimp Farming and its Sustainability. Tropical Mariculture. Academic Press. (257-288). [PDF file]
• Primavera JH. 1997. Socio-economic impacts of shrimp culture. Aquaculture Research 28:815-827. [PDF file]
• Primavera JH and Lebata MJH. 1995. Diel activity patterns in Metapenaeus and 
  Penaeus juveniles. Hydrobiologia 295:295-302. [PDF file]
• Primavera JH and Posadas RA. 1981. Studies on the egg quality of Penaeus monodon Fabricus, based on morphology and hatching rates. Aquaculture 22:269-277. [PDF file]
• Primavera JH. 1979. Notes on the courtship and mating behaviour in Penaeus monodon 
  Fabricus. Crustaceana (3). [PDF file]